Cortessa helps researchers, labs, and early-stage biotech teams analyze data, communicate findings clearly, and present their work credibly online — backed by published research and open-source tools with real usage.
We don't sell templates or generic execution. We sell judgment — the difference between an analysis that looks right and one that is right.
Each module can stand alone — but most clients start with analysis, and grow into the rest once trust is established.
RNA-seq and NGS analysis, statistics, and publication-ready figures — with a written interpretation, not just a script output.
Replaces a vague line like "we use advanced AI-driven methods" with a precise one a reviewer or investor can actually evaluate — the same standard of precision as the analysis itself, applied to how it's written.
A website that reads the way a real lab page should: publications pulled in automatically and correctly, research interests described the way a scientist would say them — not boilerplate agency copy.
Every analysis follows a defined, defensible workflow — not a black box. Pick an assay type to see the actual steps and tools involved.
Every entry here is independently verifiable — not portfolio copy.
Three open-source packages, 7,000+ combined downloads — three sole-author preprints — one live example of the website module.
A Python package that resolves gene identifiers across naming conventions and databases, cutting out one of the most common friction points in cross-dataset analysis.
View on PyPI →A tool for working with Phred quality scores in sequencing data, built to speed up a routine but essential step of NGS quality control.
View on PyPI →A package for evolutionary motif analysis, used to identify and compare conserved sequence patterns across genomic datasets.
View on PyPI →Sole-author analysis integrating multiple omics layers within the TCGA breast cancer cohort to characterize patterns across the dataset.
Read preprint →A multi-omics investigation into MEF2C haploinsufficiency, examining its molecular signatures independently, sole-author, start to finish.
Read preprint →Whole-genome sequencing analysis of the HCC1395 reference cell line, characterizing somatic variation with a fully reproducible pipeline.
Read preprint →A demonstration build of the Module 3 offering: auto-synced publications feed, clean research-interest framing, no generic template filler.
View demo →No account managers, no subcontracted analysts. When you work with Cortessa, you work directly with the person who runs the analysis.
Hi, my name is Taha Ahmad.
I graduated in Biology from METU and am currently pursuing an M.Sc. at TUM School of Life Sciences. Along the way, I've gained experience across both academia and industry, working on projects in computational biology, bioinformatics, biotechnology, and scientific software development, including R&D at Ankara University Biomedical Engineering and industry experience at BIOMATEN, METU's biomaterials research center.
I started Cortessa because I genuinely enjoy using computation to solve biological problems. Whether it's analyzing sequencing data, building reproducible workflows, developing scientific software, or creating research-focused digital platforms, my goal is always the same: to deliver work that is technically sound, practical, and genuinely useful.
Cortessa is an independent consultancy, and every project is handled personally—from the initial discussion to the final deliverables. I intentionally take on a limited number of projects so that each client receives the time, attention, and quality their work deserves.
The starter price reflects where the business is right now, not the ceiling of the work — it's an early-stage rate that moves up as the track record grows, and locking it in now is the advantage of starting early with Cortessa.
Exact price depends on dataset size and analysis type — confirmed in writing before work starts.
Price and timeline are worked out together after a short conversation about what you need — same fixed-scope principle, just sized to a bigger project.
No open-ended hours. You know the scope and the price before we start.
Send the dataset and the question you're trying to answer — no need to pre-clean it.
A flat price for a defined deliverable, confirmed before any work begins.
QC, analysis, and publication-ready visuals delivered within about a week.
A written interpretation so the result is usable, not just technically correct.
Cortessa is deliberately narrow. That's not a limitation — it's the point.
Just tell us upfront — most academic clients pay via a lab purchase order or invoice rather than a personal card. We'll confirm your institution's process before quoting, and issue a formal invoice that fits it. If your university's PO process takes a few weeks, we'll plan the timeline around that rather than assuming a same-week start.
Yes. QC and preprocessing are part of the Analysis Starter Package, not a prerequisite for it. Send the data as it exists — raw, messy, partially labeled — and the cleanup happens as step one, not something you need to solve before reaching out.
Yes, happily, especially for unpublished data or pre-patent work. It's normal to ask, and we'll sign before any dataset changes hands if you'd like one in place.
Most commonly RNA-seq and other NGS data (FASTQ, BAM, count matrices), along with standard tabular formats (CSV, TSV, Excel) for other omics or experimental data. If you're not sure your format is supported, ask — it's a five-minute answer either way.
That happens, and it's not a failure — it's often the actual finding. The written summary will say so plainly, and one round of clarifying revisions is included if you need the analysis extended or re-framed around a follow-up question.
No — this is a paid service, not a collaboration seeking authorship. If your contribution standards call for acknowledgment given the scope of analytical work involved, that's entirely your call to make.
Yes — all work is remote, and most communication happens over email or a short call. Time zones are rarely an issue given the project turnaround is measured in days, not hours.
Then you'll be told that directly, ideally before any money changes hands. Generic web design, marketing work, and open-ended consulting are explicitly outside scope — see the section above — and it's more useful to say so early than to take on a project outside real expertise.
Tell us what you're working with — we'll tell you honestly whether we're the right fit.